pkg update and first config fix

org-brain not working, add org-roam

lisp/ess/etc/ESSR/R/.basic.R

@@ -1,6 +1,6 @@
 #### Essential functionality needed by ESS
 
-## Should work on *all* vesions of R.
+## Should work on *all* versions of R.
 ## Do not use _ in names, nor :: , nor 1L etc, as they
 ## cannot be parsed in old R versions
 
@@ -32,15 +32,18 @@
     ##   utils:::print.help_files_with_topic (used internally when there's
     ##   more than one a package) uses the quoted call
     ##   MM: don't understand; more specifically?
-    .ess.help <- function(...) {
+    ..help <- function(...) {
         do.call(get("help", envir = .GlobalEnv), list(...))
     }
 
     if (.ess.Rversion > "2.10") {
         ## Abbreviating help_type to avoid underscore
-        .ess.help(..., help = help.type)
+        if(!is.null(getOption("warnPartialMatchArgs"))) {
+            op <- options(warnPartialMatchArgs = FALSE); on.exit(options(op))
+        }
+        ..help(..., help = help.type)
     } else {
-        .ess.help(..., htmlhelp = help.type == "html")
+        ..help(..., htmlhelp = help.type == "html")
     }
 }
 
@@ -145,7 +148,7 @@
     ## The following on.exit infloops in R 3.3.0
     ## https://github.com/emacs-ess/ESS/issues/334
     ## https://bugs.r-project.org/bugzilla/show_bug.cgi?id=16971
-    ## So we are cleanning it in .ess.source instead.
+    ## So we are cleaning it in .ess.source instead.
     ## on.exit(file.remove(file))
     .ess.source(file, visibly = visibly, output = output,
                 max.deparse.length = max.deparse.length,