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This commit is contained in:
Daniel Weschke
2025-06-22 17:08:08 +02:00
parent 54e5633369
commit 16a0a6db93
558 changed files with 68349 additions and 26568 deletions
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3
lisp/org-roam/org-roam-capture.el
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@@ -1,11 +1,10 @@
;;; org-roam-capture.el --- Capture functionality -*- coding: utf-8; lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (dash "2.13") (org "9.6") (emacsql "4.1.0") (magit-section "3.0.0"))
;; This file is NOT part of GNU Emacs.

3
lisp/org-roam/org-roam-compat.el
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@@ -1,11 +1,10 @@
;;; org-roam-compat.el --- Backward compatibility code -*- coding: utf-8; lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1"))
;; This file is NOT part of GNU Emacs.

3
lisp/org-roam/org-roam-dailies.el
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@@ -1,13 +1,12 @@
;;; org-roam-dailies.el --- Daily-notes for Org-roam -*- coding: utf-8; lexical-binding: t; -*-
;;;
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020 Leo Vivier <leo.vivier+dev@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; Leo Vivier <leo.vivier+dev@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (dash "2.13") (org-roam "2.1"))
;; This file is NOT part of GNU Emacs.

5
lisp/org-roam/org-roam-db.el
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@@ -1,11 +1,10 @@
;;; org-roam-db.el --- Org-roam database API -*- coding: utf-8; lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (dash "2.13") (org "9.6") (emacsql "4.1.0") (magit-section "3.0.0"))
;; This file is NOT part of GNU Emacs.
@@ -108,7 +107,7 @@ ROAM_REFS."
:type '(alist))
;;; Variables
(defconst org-roam-db-version 18)
(defconst org-roam-db-version 20)
(defvar org-roam-db--connection (make-hash-table :test #'equal)
"Database connection to Org-roam database.")

3
lisp/org-roam/org-roam-export.el
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@@ -1,11 +1,10 @@
;;; org-roam-export.el --- Org-roam org-export tweaks -*- coding: utf-8; lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (org "9.6") (org-roam "2.1"))
;; This file is NOT part of GNU Emacs.

3
lisp/org-roam/org-roam-graph.el
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@@ -1,11 +1,10 @@
;;; org-roam-graph.el --- Basic graphing functionality for Org-roam -*- coding: utf-8; lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (org "9.6") (org-roam "2.1"))
;; This file is NOT part of GNU Emacs.

3
lisp/org-roam/org-roam-id.el
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@@ -1,11 +1,10 @@
;;; org-roam-id.el --- ID-related utilities for Org-roam -*- lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (dash "2.13") (org "9.6") (magit-section "3.0.0"))
;; This file is NOT part of GNU Emacs.

3
lisp/org-roam/org-roam-log.el
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@@ -1,11 +1,10 @@
;;; org-roam-log.el --- Integrations with Org-log -*- coding: utf-8; lexical-binding: t; -*-
;; Copyright © 2022-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2022-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (dash "2.13") (org "9.6") (emacsql "4.1.0") (magit-section "3.0.0"))
;; This file is NOT part of GNU Emacs.

3
lisp/org-roam/org-roam-migrate.el
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@@ -1,11 +1,10 @@
;;; org-roam-migrate.el --- Migration utilities from v1 to v2 -*- coding: utf-8; lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (dash "2.13") (org "9.6") (emacsql "4.1.0") (magit-section "3.0.0"))
;; This file is NOT part of GNU Emacs.

86
lisp/org-roam/org-roam-mode.el
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@@ -1,11 +1,10 @@
;;; org-roam-mode.el --- Major mode for special Org-roam buffers -*- lexical-binding: t -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (dash "2.13") (org "9.6") (emacsql "4.1.0") (magit-section "3.0.0"))
;; This file is NOT part of GNU Emacs.
@@ -658,17 +657,26 @@ This is the ROW within FILE."
(end-of-line)
(point)))))
(defun org-roam-unlinked-references--rg-command (titles)
"Return the ripgrep command searching for TITLES."
(defun org-roam-unlinked-references--rg-command (titles temp-file)
"Return the ripgrep command searching for TITLES using TEMP-FILE for pattern.
This avoids shell escaping issues by writing the pattern to a file instead
of passing it directly through the shell command line."
;; Write pattern to temp file to avoid shell escaping issues with quotes,
;; spaces, and other special characters in titles
(with-temp-file temp-file
(insert "\\[([^[]]++|(?R))*\\]"
(mapconcat (lambda (title)
;; Use regexp-quote instead of shell-quote-argument
;; since we're writing a regex pattern, not a shell argument
(format "|(\\b%s\\b)" (regexp-quote title)))
titles "")))
(concat "rg --follow --only-matching --vimgrep --pcre2 --ignore-case "
(mapconcat (lambda (glob) (concat "--glob " glob))
(org-roam--list-files-search-globs org-roam-file-extensions)
" ")
(format " '\\[([^[]]++|(?R))*\\]%s' "
(mapconcat (lambda (title)
(format "|(\\b%s\\b)" (shell-quote-argument title)))
titles ""))
(shell-quote-argument org-roam-directory)))
" --file " (shell-quote-argument temp-file) " "
(shell-quote-argument (expand-file-name org-roam-directory))))
(defun org-roam-unlinked-references-section (node)
"The unlinked references section for NODE.
@@ -679,33 +687,39 @@ References from FILE are excluded."
(shell-command-to-string "rg --pcre2-version"))))
(let* ((titles (cons (org-roam-node-title node)
(org-roam-node-aliases node)))
(rg-command (org-roam-unlinked-references--rg-command titles))
(results (split-string (shell-command-to-string rg-command) "\n"))
f row col match)
(magit-insert-section (unlinked-references)
(magit-insert-heading "Unlinked References:")
(dolist (line results)
(save-match-data
(when (string-match org-roam-unlinked-references-result-re line)
(setq f (match-string 1 line)
row (string-to-number (match-string 2 line))
col (string-to-number (match-string 3 line))
match (match-string 4 line))
(when (and match
(not (file-equal-p (org-roam-node-file node) f))
(member (downcase match) (mapcar #'downcase titles)))
(magit-insert-section section (org-roam-grep-section)
(oset section file f)
(oset section row row)
(oset section col col)
(insert (propertize (format "%s:%s:%s"
(truncate-string-to-width (file-name-base f) 15 nil nil t)
row col) 'font-lock-face 'org-roam-dim)
" "
(org-roam-fontify-like-in-org-mode
(org-roam-unlinked-references-preview-line f row))
"\n"))))))
(insert ?\n)))))
;; Create temp file for the regex pattern
(temp-file (make-temp-file "org-roam-rg-pattern-"))
(rg-command (org-roam-unlinked-references--rg-command titles temp-file)))
;; Use unwind-protect to ensure temp file cleanup even if errors occur
(unwind-protect
(let* ((results (split-string (shell-command-to-string rg-command) "\n"))
f row col match)
(magit-insert-section (unlinked-references)
(magit-insert-heading "Unlinked References:")
(dolist (line results)
(save-match-data
(when (string-match org-roam-unlinked-references-result-re line)
(setq f (match-string 1 line)
row (string-to-number (match-string 2 line))
col (string-to-number (match-string 3 line))
match (match-string 4 line))
(when (and match
(not (file-equal-p (org-roam-node-file node) f))
(member (downcase match) (mapcar #'downcase titles)))
(magit-insert-section section (org-roam-grep-section)
(oset section file f)
(oset section row row)
(oset section col col)
(insert (propertize (format "%s:%s:%s"
(truncate-string-to-width (file-name-base f) 15 nil nil t)
row col) 'font-lock-face 'org-roam-dim)
" "
(org-roam-fontify-like-in-org-mode
(org-roam-unlinked-references-preview-line f row))
"\n"))))))
(insert ?\n)))
;; Clean up temp file - this runs even if an error occurs above
(delete-file temp-file)))))
(provide 'org-roam-mode)
;;; org-roam-mode.el ends here

115
lisp/org-roam/org-roam-node.el
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@@ -1,11 +1,10 @@
;;; org-roam-node.el --- Interfacing and interacting with nodes -*- lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (dash "2.13") (org "9.6") (magit-section "3.0.0"))
;; This file is NOT part of GNU Emacs.
@@ -39,6 +38,16 @@
;;;; Completing-read
(defcustom org-roam-node-display-template "${title}"
"Configures display formatting for Org-roam node.
If it is a function, it will be called to format a node.
Its result is expected to be a string (potentially with
embedded properties).
If it is a string and it will be used as described in org-roam
(see org-roam-node-display-template)
When it is a string, the following processing is done:
Patterns of form \"${field-name:length}\" are interpolated based
on the current node.
@@ -64,9 +73,23 @@ as many characters as possible and will be aligned accordingly.
A closure can also be assigned to this variable in which case the
closure is evaluated and the return value is used as the
template. The closure must evaluate to a valid template string."
template. The closure must evaluate to a valid template string.
When org-roam-node-display-template is a function, the function is
expected to return a string, potentially propertized. For example, the
following function shows the title and base filename of the node:
\(defun my--org-roam-format (node)
\"formats the node\"
(format \"%-40s %s\"
(if (org-roam-node-title node)
(propertize (org-roam-node-title node) 'face 'org-todo)
\"\")
(file-name-nondirectory (org-roam-node-file node))))
\q(setq org-roam-node-display-template 'my--org-roam-format)"
:group 'org-roam
:type '(string function))
:type '(choice string function))
(defcustom org-roam-node-annotation-function #'org-roam-node-read--annotation
"This function used to attach annotations for `org-roam-node-read'.
@@ -90,7 +113,7 @@ argument, an `org-roam-node', and return a string.
If a string is provided, it is a template string expanded by
`org-roam-node--format-entry'."
:group 'org-roam
:type '(string function))
:type '(choice string function))
(defcustom org-roam-node-template-prefixes
'(("tags" . "#")
@@ -151,6 +174,11 @@ This path is relative to `org-roam-directory'."
;;; Definition
(cl-defstruct (org-roam-node (:constructor org-roam-node-create)
(:constructor org-roam-node-create-from-db
(title aliases ; 2
id file file-title level todo ; 5
point priority scheduled deadline properties ;;5
olp file-atime file-mtime tags refs)) ;;5
(:copier nil))
"A heading or top level file with an assigned ID property."
file file-title file-hash file-atime file-mtime
@@ -352,23 +380,27 @@ nodes."
(defun org-roam-node-list ()
"Return all nodes stored in the database as a list of `org-roam-node's."
(let ((rows (org-roam-db-query
"SELECT
"
SELECT
title,
aliases,
id,
file,
filetitle,
\"level\",
todo,
pos,
priority ,
scheduled ,
deadline ,
title,
properties ,
olp,
atime,
mtime,
'(' || group_concat(tags, ' ') || ')' as tags,
aliases,
refs
FROM
(
@@ -417,32 +449,20 @@ FROM
LEFT JOIN refs ON refs.node_id = nodes.id
GROUP BY nodes.id, tags.tag, aliases.alias )
GROUP BY id, tags )
GROUP BY id")))
(cl-loop for row in rows
append (pcase-let* ((`(
,id ,file ,file-title ,level ,todo ,pos ,priority ,scheduled ,deadline
,title ,properties ,olp ,atime ,mtime ,tags ,aliases ,refs)
row)
(all-titles (cons title aliases)))
(mapcar (lambda (temp-title)
(org-roam-node-create :id id
:file file
:file-title file-title
:file-atime atime
:file-mtime mtime
:level level
:point pos
:todo todo
:priority priority
:scheduled scheduled
:deadline deadline
:title temp-title
:aliases aliases
:properties properties
:olp olp
:tags tags
:refs refs))
all-titles)))))
GROUP BY id
")))
(mapcan
(lambda (row)
(let (
(all-titles (cons (car row) (nth 1 row)))
)
(mapcar (lambda (temp-title)
(apply 'org-roam-node-create-from-db (cons temp-title (cdr row))))
all-titles)
))
rows)
)
)
;;;; Finders
(defun org-roam-node-marker (node)
@@ -556,6 +576,25 @@ PROMPT is a string to show at the beginning of the mini-buffer, defaulting to \"
(or (cdr (assoc node nodes))
(org-roam-node-create :title node))))
(defun org-roam--format-nodes-using-template (nodes)
"Formats NODES using org-roam template features.
Uses org-roam--node-display-template."
(let (
(wTemplate (org-roam-node--process-display-format org-roam-node-display-template))
)
(mapcar (lambda (node)
(org-roam-node-read--to-candidate node wTemplate)) nodes))
)
(defun org-roam--format-nodes-using-function (nodes)
"Formats NODES using the function org-roam-node-display-template."
(mapcar (lambda (node)
(cons
(propertize (funcall org-roam-node-display-template node) 'node node)
node))
nodes)
)
(defun org-roam-node-read--completions (&optional filter-fn sort-fn)
"Return an alist for node completion.
The car is the displayed title or alias for the node, and the cdr
@@ -565,15 +604,17 @@ and when nil is returned the node will be filtered out.
SORT-FN is a function to sort nodes. See `org-roam-node-read-sort-by-file-mtime'
for an example sort function.
The displayed title is formatted according to `org-roam-node-display-template'."
(let* ((template (org-roam-node--process-display-format org-roam-node-display-template))
(let* (
(nodes (org-roam-node-list))
(nodes (if filter-fn
(cl-remove-if-not
(lambda (n) (funcall filter-fn n))
nodes)
nodes))
(nodes (mapcar (lambda (node)
(org-roam-node-read--to-candidate node template)) nodes))
(nodes (if (functionp org-roam-node-display-template)
(org-roam--format-nodes-using-function nodes)
(org-roam--format-nodes-using-template nodes)))
(sort-fn (or sort-fn
(when org-roam-node-default-sort
(intern (concat "org-roam-node-read-sort-by-"

3
lisp/org-roam/org-roam-overlay.el
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@@ -1,11 +1,10 @@
;;; org-roam-overlay.el --- Link overlay for [id:] links to Org-roam nodes -*- coding: utf-8; lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (org "9.6") (org-roam "2.1"))
;; This file is NOT part of GNU Emacs.

30
lisp/org-roam/org-roam-pkg.el
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@@ -1,18 +1,14 @@
(define-package "org-roam" "20250218.1722" "A database abstraction layer for Org-mode"
'((emacs "26.1")
(dash "2.13")
(org "9.6")
(emacsql "4.1.0")
;; -*- no-byte-compile: t; lexical-binding: nil -*-
(define-package "org-roam" "20250609.820"
"A database abstraction layer for Org-mode."
'((emacs "26.1")
(dash "2.13")
(org "9.6")
(emacsql "4.1.0")
(magit-section "3.0.0"))
:commit "0037daaf3eb2d1c3a1c215efb4d38a32db140224" :authors
'(("Jethro Kuan" . "jethrokuan95@gmail.com"))
:maintainers
'(("Jethro Kuan" . "jethrokuan95@gmail.com"))
:maintainer
'("Jethro Kuan" . "jethrokuan95@gmail.com")
:keywords
'("org-mode" "roam" "convenience")
:url "https://github.com/org-roam/org-roam")
;; Local Variables:
;; no-byte-compile: t
;; End:
:url "https://github.com/org-roam/org-roam"
:commit "c17295134510c8759baad0e8a9f151029d5e5fe1"
:revdesc "c17295134510"
:keywords '("org-mode" "roam" "convenience")
:authors '(("Jethro Kuan" . "jethrokuan95@gmail.com"))
:maintainers '(("Jethro Kuan" . "jethrokuan95@gmail.com")))

3
lisp/org-roam/org-roam-protocol.el
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@@ -1,10 +1,9 @@
;;; org-roam-protocol.el --- Protocol handler for roam:// links -*- coding: utf-8; lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (org "9.6") (org-roam "2.1"))
;; This file is NOT part of GNU Emacs.

6
lisp/org-roam/org-roam-utils.el
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@@ -1,11 +1,10 @@
;;; org-roam-utils.el --- Utilities for Org-roam -*- lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Requires: ((emacs "26.1") (dash "2.13") (org "9.6"))
;; This file is NOT part of GNU Emacs.
@@ -163,7 +162,8 @@ If FILE, set `default-directory' to FILE's directory and insert its contents."
(let ((current-org-roam-directory (make-symbol "current-org-roam-directory")))
`(let ((,current-org-roam-directory org-roam-directory))
(with-temp-buffer
(let ((org-roam-directory ,current-org-roam-directory))
(let ((org-roam-directory ,current-org-roam-directory)
(org-inhibit-startup t))
(delay-mode-hooks (org-mode))
(when ,file
(insert-file-contents ,file)

5
lisp/org-roam/org-roam.el
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@@ -1,11 +1,12 @@
;;; org-roam.el --- A database abstraction layer for Org-mode -*- coding: utf-8; lexical-binding: t; -*-
;; Copyright © 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
;; Copyright © 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
;; Author: Jethro Kuan <jethrokuan95@gmail.com>
;; URL: https://github.com/org-roam/org-roam
;; Keywords: org-mode, roam, convenience
;; Version: 2.2.2
;; Package-Version: 20250609.820
;; Package-Revision: c17295134510
;; Package-Requires: ((emacs "26.1") (dash "2.13") (org "9.6") (emacsql "4.1.0") (magit-section "3.0.0"))
;; This file is NOT part of GNU Emacs.

8
lisp/org-roam/org-roam.info
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@@ -1,7 +1,7 @@
This is org-roam.info, produced by makeinfo version 7.1.1 from
org-roam.texi.
Copyright (C) 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
Copyright (C) 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
You can redistribute this document and/or modify it under the terms
of the GNU General Public License as published by the Free Software
@@ -24,9 +24,9 @@ File: org-roam.info, Node: Top, Next: Introduction, Up: (dir)
Org-roam User Manual
********************
This manual is for Org-roam version 2.2.2.
This manual is for Org-roam version 2.3.0.
Copyright (C) 2020-2022 Jethro Kuan <jethrokuan95@gmail.com>
Copyright (C) 2020-2025 Jethro Kuan <jethrokuan95@gmail.com>
You can redistribute this document and/or modify it under the terms
of the GNU General Public License as published by the Free Software
@@ -2402,7 +2402,7 @@ File: org-roam.info, Node: Variable Index, Prev: Function Index, Up: Top
Appendix D Variable Index
*************************
Emacs 29.4 (Org mode 9.7.19)
Emacs 30.1 (Org mode 9.7.29)

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